nipype.interfaces.slicer.utilities module

Autogenerated file - DO NOT EDIT If you spot a bug, please report it on the mailing list and/or change the generator.

EMSegmentTransformToNewFormat

Link to code

Bases: SEMLikeCommandLine

Wrapped executable: EMSegmentTransformToNewFormat.

title:

Transform MRML Files to New EMSegmenter Standard

category:

Utilities

description:

Transform MRML Files to New EMSegmenter Standard

argsa unicode string

Additional parameters to the command. Maps to a command-line argument: %s.

environa dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’

Environment variables. (Nipype default value: {})

inputMRMLFileNamea pathlike object or string representing an existing file

Active MRML scene that contains EMSegment algorithm parameters in the format before 3.6.3 - please include absolute file name in path. Maps to a command-line argument: --inputMRMLFileName %s.

outputMRMLFileNamea boolean or a pathlike object or string representing a file

Write out the MRML scene after transformation to format 3.6.3 has been made. - has to be in the same directory as the input MRML file due to Slicer Core bug - please include absolute file name in path . Maps to a command-line argument: --outputMRMLFileName %s.

templateFlaga boolean

Set to true if the transformed mrml file should be used as template file . Maps to a command-line argument: --templateFlag.

outputMRMLFileNamea pathlike object or string representing an existing file

Write out the MRML scene after transformation to format 3.6.3 has been made. - has to be in the same directory as the input MRML file due to Slicer Core bug - please include absolute file name in path .