Package htsjdk.samtools
Enum SQTagUtil.SQBase
- java.lang.Object
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- java.lang.Enum<SQTagUtil.SQBase>
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- htsjdk.samtools.SQTagUtil.SQBase
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- All Implemented Interfaces:
Serializable
,Comparable<SQTagUtil.SQBase>
- Enclosing class:
- SQTagUtil
public static enum SQTagUtil.SQBase extends Enum<SQTagUtil.SQBase>
The ordinals of these are stored in the high-order 2 bits of each byte of the SQ tag. Note that these have the convenient property that the binary complement of each ordinal, masked to the two low-order bits, is the complementary base.
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description Character
getBase()
static SQTagUtil.SQBase
valueOf(String name)
Returns the enum constant of this type with the specified name.static SQTagUtil.SQBase[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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SQ_A
public static final SQTagUtil.SQBase SQ_A
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SQ_C
public static final SQTagUtil.SQBase SQ_C
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SQ_G
public static final SQTagUtil.SQBase SQ_G
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SQ_T
public static final SQTagUtil.SQBase SQ_T
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Method Detail
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values
public static SQTagUtil.SQBase[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (SQTagUtil.SQBase c : SQTagUtil.SQBase.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static SQTagUtil.SQBase valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
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getBase
public Character getBase()
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