Class BaseQualityScore
- java.lang.Object
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- htsjdk.samtools.cram.encoding.readfeatures.BaseQualityScore
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- All Implemented Interfaces:
ReadFeature
,Serializable
public final class BaseQualityScore extends Object implements Serializable, ReadFeature
A read feature representing a single quality score in a read.- See Also:
- Serialized Form
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Field Summary
Fields Modifier and Type Field Description static byte
operator
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Constructor Summary
Constructors Constructor Description BaseQualityScore(int position, byte qualityScore)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
equals(Object o)
byte
getOperator()
Read features are distinguished by operator, similar to cigar operator.int
getPosition()
byte
getQualityScore()
int
hashCode()
String
toString()
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Field Detail
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operator
public static final byte operator
- See Also:
- Constant Field Values
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Method Detail
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getOperator
public byte getOperator()
Description copied from interface:ReadFeature
Read features are distinguished by operator, similar to cigar operator.- Specified by:
getOperator
in interfaceReadFeature
- Returns:
- type of the read feature
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getPosition
public int getPosition()
- Specified by:
getPosition
in interfaceReadFeature
- Returns:
- zero-based position in the read
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getQualityScore
public byte getQualityScore()
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